doubleSigmoid.C
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27 
28 #include "doubleSigmoid.H"
30 
31 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
32 
33 namespace Foam
34 {
35 namespace energyScalingFunctions
36 {
37 
38 // * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
39 
41 
43 (
47 );
48 
49 // * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * * //
50 
51 scalar doubleSigmoid::sigmoidScale
52  (
53  const scalar r,
54  const scalar shift,
55  const scalar scale
56  ) const
57 {
58  return 1.0 / (1.0 + exp( scale * (r - shift)));
59 }
60 
61 
62 // * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
63 
65 (
66  const word& name,
67  const dictionary& energyScalingFunctionProperties,
68  const pairPotential& pairPot
69 )
70 :
71  energyScalingFunction(name, energyScalingFunctionProperties, pairPot),
72  doubleSigmoidCoeffs_
73  (
74  energyScalingFunctionProperties.subDict(typeName + "Coeffs")
75  ),
76  shift1_(doubleSigmoidCoeffs_.get<scalar>("shift1")),
77  scale1_(doubleSigmoidCoeffs_.get<scalar>("scale1")),
78  shift2_(doubleSigmoidCoeffs_.get<scalar>("shift2")),
79  scale2_(doubleSigmoidCoeffs_.get<scalar>("scale2"))
80 {}
81 
82 
83 // * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * * //
84 
85 void doubleSigmoid::scaleEnergy(scalar& e, const scalar r) const
86 {
87  e *= sigmoidScale(r, shift1_, scale1_) * sigmoidScale(r, shift2_, scale2_);
88 }
89 
90 
91 bool doubleSigmoid::read(const dictionary& energyScalingFunctionProperties)
92 {
94 
95  doubleSigmoidCoeffs_ =
96  energyScalingFunctionProperties.subDict(typeName + "Coeffs");
97 
98  doubleSigmoidCoeffs_.readEntry("shift1", shift1_);
99  doubleSigmoidCoeffs_.readEntry("scale1", scale1_);
100  doubleSigmoidCoeffs_.readEntry("shift2", shift2_);
101  doubleSigmoidCoeffs_.readEntry("scale2", scale2_);
102 
103  return true;
104 }
105 
106 
107 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
108 
109 } // End namespace energyScalingFunctions
110 } // End namespace Foam
111 
112 // ************************************************************************* //
List< ReturnType > get(const UPtrList< T > &list, const AccessOp &aop)
List of values generated by applying the access operation to each list item.
void scaleEnergy(scalar &e, const scalar r) const
Definition: doubleSigmoid.C:78
A list of keyword definitions, which are a keyword followed by a number of values (eg...
Definition: dictionary.H:129
defineTypeNameAndDebug(doubleSigmoid, 0)
const dictionary & subDict(const word &keyword, enum keyType::option matchOpt=keyType::REGEX) const
Find and return a sub-dictionary.
Definition: dictionary.C:441
Macros for easy insertion into run-time selection tables.
bool readEntry(const word &keyword, T &val, enum keyType::option matchOpt=keyType::REGEX, IOobjectOption::readOption readOpt=IOobjectOption::MUST_READ) const
Find entry and assign to T val. FatalIOError if it is found and the number of tokens is incorrect...
const dimensionedScalar e
Elementary charge.
Definition: createFields.H:11
word name(const expressions::valueTypeCode typeCode)
A word representation of a valueTypeCode. Empty for expressions::valueTypeCode::INVALID.
Definition: exprTraits.C:127
dimensionedScalar exp(const dimensionedScalar &ds)
const dictionary & energyScalingFunctionProperties() const
bool read(const dictionary &energyScalingFunctionProperties)
Read dictionary.
Definition: doubleSigmoid.C:84
A class for handling words, derived from Foam::string.
Definition: word.H:63
addToRunTimeSelectionTable(energyScalingFunction, doubleSigmoid, dictionary)
virtual bool read(const dictionary &energyScalingFunctionProperties)=0
Read energyScalingFunction dictionary.
doubleSigmoid(const word &name, const dictionary &energyScalingFunctionProperties, const pairPotential &pairPot)
Construct from components.
Definition: doubleSigmoid.C:58
Namespace for OpenFOAM.