45 Foam::label Foam::globalPoints::countPatchPoints
52 for (
const polyPatch& pp :
patches)
56 nTotPoints += pp.nPoints();
63 Foam::label Foam::globalPoints::findSamePoint
69 const label proci = globalTransforms_.processor(info);
70 const label index = globalTransforms_.index(info);
76 globalTransforms_.processor(allInfo[i]) == proci
77 && globalTransforms_.index(allInfo[i]) == index
93 scalar tol = refCast<const coupledPolyPatch>
95 mesh_.boundaryMesh()[patchi]
111 sendInfo[i] = globalTransforms_.encode
113 globalTransforms_.processor(info[i]),
114 globalTransforms_.index(info[i]),
115 globalTransforms_.addToTransformIndex
117 globalTransforms_.transformIndex(info[i]),
128 void Foam::globalPoints::addToSend
131 const label patchPointi,
134 DynamicList<label>& patchFaces,
135 DynamicList<label>& indexInFace,
136 DynamicList<labelPairList>& allInfo
143 const label meshPointi = pp.meshPoints()[patchPointi];
149 for (
const label patchFacei :
pFaces)
151 const face&
f = pp[patchFacei];
153 patchFaces.
append(patchFacei);
154 indexInFace.append(
f.
find(meshPointi));
157 allInfo.append(addSendTransform(pp.index(), knownInfo));
162 bool Foam::globalPoints::mergeInfo
165 const label localPointi,
172 bool anyChanged =
false;
176 label newI = newInfo.size();
177 newInfo.setSize(newI + nbrInfo.size());
187 label index = findSamePoint(myInfo, nbrInfo[i]);
192 newInfo[newI++] = nbrInfo[i];
201 if (myInfo[index] == nbrInfo[i])
207 label myTransform = globalTransforms_.transformIndex
211 label nbrTransform = globalTransforms_.transformIndex
217 label minTransform = globalTransforms_.minimumTransformIndex
223 if (minTransform != myTransform)
226 newInfo[index] = nbrInfo[i];
233 newInfo.setSize(newI);
234 myInfo.transfer(newInfo);
240 Foam::label Foam::globalPoints::meshToLocalPoint
242 const Map<label>& meshToPatchPoint,
243 const label meshPointi
248 meshToPatchPoint.size() == 0
250 : meshToPatchPoint[meshPointi]
255 Foam::label Foam::globalPoints::localToMeshPoint
258 const label localPointi
263 patchToMeshPoint.size() == 0
265 : patchToMeshPoint[localPointi]
270 bool Foam::globalPoints::mergeInfo
273 const label localPointi
279 bool infoChanged =
false;
282 const auto iter = meshToProcPoint_.cfind(localPointi);
286 if (mergeInfo(nbrInfo, localPointi, procPoints_[iter.val()]))
297 globalTransforms_.encode
301 globalTransforms_.nullTransformIndex()
305 if (mergeInfo(nbrInfo, localPointi, knownInfo))
308 meshToProcPoint_.insert(localPointi, procPoints_.size());
310 procPoints_.append(knownInfo);
319 bool Foam::globalPoints::storeInitialInfo
322 const label localPointi
328 bool infoChanged =
false;
331 const auto iter = meshToProcPoint_.find(localPointi);
335 if (mergeInfo(nbrInfo, localPointi, procPoints_[iter.val()]))
343 meshToProcPoint_.insert(localPointi, procPoints_.size());
345 procPoints_.append(nbrInfo);
353 void Foam::globalPoints::printProcPoint
359 label proci = globalTransforms_.processor(pointInfo);
360 label index = globalTransforms_.index(pointInfo);
361 label trafoI = globalTransforms_.transformIndex(pointInfo);
363 Pout<<
" proc:" << proci;
364 Pout<<
" localpoint:";
366 Pout<<
" through transform:" 367 << trafoI <<
" bits:" 368 << globalTransforms_.decodeTransformIndex(trafoI);
372 label meshPointi = localToMeshPoint(patchToMeshPoint, index);
373 Pout<<
" at:" << mesh_.points()[meshPointi];
378 void Foam::globalPoints::printProcPoints
386 printProcPoint(patchToMeshPoint, pointInfo[i]);
392 void Foam::globalPoints::initOwnPoints
394 const Map<label>& meshToPatchPoint,
399 const polyBoundaryMesh&
patches = mesh_.boundaryMesh();
403 const polyPatch& pp =
patches[patchi];
407 const labelList& meshPoints = pp.meshPoints();
412 forAll(meshPoints, patchPointi)
414 label meshPointi = meshPoints[patchPointi];
415 label localPointi = meshToLocalPoint
424 globalTransforms_.encode
428 globalTransforms_.nullTransformIndex()
437 if (storeInitialInfo(knownInfo, localPointi))
439 changedPoints.insert(localPointi);
446 const labelList& boundaryPoints = pp.boundaryPoints();
450 label meshPointi = meshPoints[boundaryPoints[i]];
451 label localPointi = meshToLocalPoint
460 globalTransforms_.encode
464 globalTransforms_.nullTransformIndex()
468 if (storeInitialInfo(knownInfo, localPointi))
470 changedPoints.insert(localPointi);
479 void Foam::globalPoints::sendPatchPoints
481 const bool mergeSeparated,
482 const Map<label>& meshToPatchPoint,
483 PstreamBuffers& pBufs,
487 const polyBoundaryMesh&
patches = mesh_.boundaryMesh();
488 const labelPairList& patchInfo = globalTransforms_.patchTransformSign();
492 const polyPatch& pp =
patches[patchi];
500 && (mergeSeparated || patchInfo[patchi].first() == -1)
503 const processorPolyPatch& procPatch =
504 refCast<const processorPolyPatch>(pp);
508 DynamicList<label> patchFaces(pp.nPoints());
510 DynamicList<label> indexInFace(pp.nPoints());
512 DynamicList<labelPairList> allInfo(pp.nPoints());
519 const labelList& meshPoints = pp.meshPoints();
521 forAll(meshPoints, patchPointi)
523 label meshPointi = meshPoints[patchPointi];
524 label localPointi = meshToLocalPoint
530 if (changedPoints.found(localPointi))
532 label index = meshToProcPoint_[localPointi];
554 Pout<<
" Sending from " << pp.
name() <<
" to " 555 << procPatch.neighbProcNo() <<
" point information:" 556 << patchFaces.size() <<
endl;
559 UOPstream toNeighbour(procPatch.neighbProcNo(), pBufs);
560 toNeighbour << patchFaces << indexInFace << allInfo;
566 void Foam::globalPoints::receivePatchPoints
568 const bool mergeSeparated,
569 const Map<label>& meshToPatchPoint,
571 PstreamBuffers& pBufs,
581 const polyBoundaryMesh&
patches = mesh_.boundaryMesh();
582 const labelPairList& patchInfo = globalTransforms_.patchTransformSign();
585 changedPoints.clear();
589 const polyPatch& pp =
patches[patchi];
594 && (mergeSeparated || patchInfo[patchi].first() == -1)
597 const processorPolyPatch& procPatch =
598 refCast<const processorPolyPatch>(pp);
602 List<labelPairList> nbrInfo;
605 UIPstream fromNeighbour(procPatch.neighbProcNo(), pBufs);
606 fromNeighbour >> patchFaces >> indexInFace >> nbrInfo;
613 << procPatch.neighbProcNo() <<
" point information:" 614 << patchFaces.size() <<
endl;
619 const face&
f = pp[patchFaces[i]];
622 label index = (
f.
size() - indexInFace[i]) %
f.
size();
625 label meshPointi =
f[index];
627 label localPointi = meshToLocalPoint
633 if (mergeInfo(nbrInfo[i], localPointi))
635 changedPoints.insert(localPointi);
642 isA<cyclicPolyPatch>(pp)
643 && refCast<const cyclicPolyPatch>(pp).owner()
645 && (mergeSeparated || patchInfo[patchi].first() == -1)
651 const cyclicPolyPatch& cycPatch =
652 refCast<const cyclicPolyPatch>(pp);
656 const labelList& meshPoints = pp.meshPoints();
657 const labelList coupledMeshPoints(reverseMeshPoints(cycPatch));
661 label meshPointA = meshPoints[i];
662 label meshPointB = coupledMeshPoints[i];
664 if (meshPointA != meshPointB)
671 label localA = meshToLocalPoint
676 label localB = meshToLocalPoint
684 const auto procPointA = meshToProcPoint_.cfind(localA);
686 if (procPointA.found())
691 procPoints_[procPointA()]
694 if (mergeInfo(infoA, localB))
696 changedPoints.insert(localB);
701 const auto procPointB = meshToProcPoint_.cfind(localB);
703 if (procPointB.found())
707 cycPatch.neighbPatchID(),
708 procPoints_[procPointB()]
711 if (mergeInfo(infoB, localA))
713 changedPoints.insert(localA);
723 void Foam::globalPoints::remove
726 const Map<label>& directNeighbours
733 Map<label> oldMeshToProcPoint(std::move(meshToProcPoint_));
734 meshToProcPoint_.resize(oldMeshToProcPoint.size());
735 DynamicList<labelPairList> oldProcPoints(std::move(procPoints_));
736 procPoints_.setCapacity(oldProcPoints.size());
741 const label localPointi = iter.key();
744 if (pointInfo.size() == 2)
751 label proc0 = globalTransforms_.processor(pointInfo[0]);
752 label proc1 = globalTransforms_.processor(pointInfo[1]);
758 && directNeighbours.found
760 globalTransforms_.index(pointInfo[0])
765 && directNeighbours.found
767 globalTransforms_.index(pointInfo[1])
802 meshToProcPoint_.insert(localPointi, procPoints_.size());
803 procPoints_.append(pointInfo);
806 else if (pointInfo.size() == 1)
813 globalTransforms_.processor(pointInfo[0])
815 || !directNeighbours.found
817 globalTransforms_.index(pointInfo[0])
821 meshToProcPoint_.insert(localPointi, procPoints_.size());
822 procPoints_.append(pointInfo);
827 meshToProcPoint_.insert(localPointi, procPoints_.size());
828 procPoints_.append(pointInfo);
832 procPoints_.shrink();
833 meshToProcPoint_.resize(2*procPoints_.size());
839 const cyclicPolyPatch& pp
842 const cyclicPolyPatch& nbrPatch = pp.neighbPatch();
844 faceList masterFaces(nbrPatch.size());
848 masterFaces[facei] = nbrPatch[facei].reverseFace();
859 void Foam::globalPoints::calculateSharedPoints
861 const Map<label>& meshToPatchPoint,
863 const bool keepAllPoints,
864 const bool mergeSeparated
869 Pout<<
"globalPoints::calculateSharedPoints(..) : " 870 <<
"doing processor to processor communication to get sharedPoints" 872 <<
" keepAllPoints :" << keepAllPoints <<
endl 873 <<
" mergeSeparated:" << mergeSeparated <<
endl 892 initOwnPoints(meshToPatchPoint,
true, changedPoints);
914 pBufs.finishedSends();
926 Map<label> neighbourList;
929 neighbourList = meshToProcPoint_;
951 pBufs.finishedSends();
981 remove(patchToMeshPoint, neighbourList);
1000 pointPoints_.setSize(globalIndices_.localSize());
1001 List<labelPairList> transformedPoints(globalIndices_.localSize());
1007 if (pointInfo.size() >= 2)
1010 const labelPair& masterInfo = pointInfo[0];
1015 globalTransforms_.processor(masterInfo)
1018 && (globalTransforms_.index(masterInfo) == iter.key())
1021 labelList& pPoints = pointPoints_[iter.key()];
1022 pPoints.
setSize(pointInfo.size()-1);
1024 labelPairList& trafoPPoints = transformedPoints[iter.key()];
1025 trafoPPoints.setSize(pointInfo.size()-1);
1027 label nonTransformI = 0;
1028 label transformI = 0;
1030 for (label i = 1; i < pointInfo.size(); i++)
1033 label proci = globalTransforms_.processor(info);
1034 label index = globalTransforms_.index(info);
1035 label
transform = globalTransforms_.transformIndex
1040 if (
transform == globalTransforms_.nullTransformIndex())
1042 pPoints[nonTransformI++] = globalIndices_.toGlobal
1050 trafoPPoints[transformI++] = info;
1054 pPoints.setSize(nonTransformI);
1055 trafoPPoints.setSize(transformI);
1061 List<Map<label>> compactMap;
1071 transformedPointPoints_,
1079 Pout<<
"globalPoints::calculateSharedPoints(..) : " 1080 <<
"Finished global points" <<
endl;
1087 Foam::globalPoints::globalPoints
1089 const polyMesh&
mesh,
1090 const bool keepAllPoints,
1091 const bool mergeSeparated
1095 globalIndices_(mesh_.
nPoints()),
1096 globalTransforms_(
mesh),
1097 nPatchPoints_(countPatchPoints(
mesh.boundaryMesh())),
1098 procPoints_(nPatchPoints_),
1099 meshToProcPoint_(nPatchPoints_)
1102 Map<label> meshToPatchPoint(0);
1105 calculateSharedPoints
1115 Foam::globalPoints::globalPoints
1119 const bool keepAllPoints,
1120 const bool mergeSeparated
1124 globalIndices_(coupledPatch.
nPoints()),
1125 globalTransforms_(
mesh),
1126 nPatchPoints_(coupledPatch.
nPoints()),
1127 procPoints_(nPatchPoints_),
1128 meshToProcPoint_(nPatchPoints_)
1130 calculateSharedPoints
virtual const fileName & name() const
Get the name of the output serial stream. (eg, the name of the Fstream file name) ...
void size(const label n)
Older name for setAddressableSize.
void append(const T &val)
Append an element at the end of the list.
label find(const T &val, label pos=0) const
Find index of the first occurrence of the value.
A 1D array of objects of type <T>, where the size of the vector is known and used for subscript bound...
List< face > faceList
A List of faces.
Ostream & endl(Ostream &os)
Add newline and flush stream.
static bool & parRun() noexcept
Test if this a parallel run.
static int myProcNo(const label communicator=worldComm)
Number of this process (starting from masterNo() = 0)
static bool less(const vector &x, const vector &y)
To compare normals.
const labelList & meshPoints() const
Return labelList of mesh points in patch.
#define forAll(list, i)
Loop across all elements in list.
HashSet< label, Hash< label > > labelHashSet
A HashSet of labels, uses label hasher.
A list of faces which address into the list of points.
const Map< label > & meshPointMap() const
Mesh point map.
void setSize(const label n)
Alias for resize()
"scheduled" : (MPI_Send, MPI_Recv)
void sort(UList< T > &list)
Sort the list.
List< labelPair > labelPairList
List of labelPairs.
void reset(const dimensionSet &ds)
Copy assign the exponents from the dimensionSet.
int debug
Static debugging option.
Pair< label > labelPair
A pair of labels.
defineTypeNameAndDebug(combustionModel, 0)
PrimitivePatch< List< face >, const pointField & > primitiveFacePatch
A PrimitivePatch with List storage for the faces, const reference for the point field.
Info<< "Finished reading KIVA file"<< endl;cellShapeList cellShapes(nPoints);labelList cellZoning(nPoints, -1);const cellModel &hex=cellModel::ref(cellModel::HEX);labelList hexLabels(8);label activeCells=0;labelList pointMap(nPoints);forAll(pointMap, i){ pointMap[i]=i;}for(label i=0;i< nPoints;i++){ if(f[i] > 0.0) { hexLabels[0]=i;hexLabels[1]=i1tab[i];hexLabels[2]=i3tab[i1tab[i]];hexLabels[3]=i3tab[i];hexLabels[4]=i8tab[i];hexLabels[5]=i1tab[i8tab[i]];hexLabels[6]=i3tab[i1tab[i8tab[i]]];hexLabels[7]=i3tab[i8tab[i]];cellShapes[activeCells].reset(hex, hexLabels);edgeList edges=cellShapes[activeCells].edges();forAll(edges, ei) { if(edges[ei].mag(points)< SMALL) { label start=pointMap[edges[ei].start()];while(start !=pointMap[start]) { start=pointMap[start];} label end=pointMap[edges[ei].end()];while(end !=pointMap[end]) { end=pointMap[end];} label minLabel=min(start, end);pointMap[start]=pointMap[end]=minLabel;} } cellZoning[activeCells]=idreg[i];activeCells++;}}cellShapes.setSize(activeCells);cellZoning.setSize(activeCells);forAll(cellShapes, celli){ cellShape &cs=cellShapes[celli];forAll(cs, i) { cs[i]=pointMap[cs[i]];} cs.collapse();}label bcIDs[11]={-1, 0, 2, 4, -1, 5, -1, 6, 7, 8, 9};const label nBCs=12;const word *kivaPatchTypes[nBCs]={ &wallPolyPatch::typeName, &wallPolyPatch::typeName, &wallPolyPatch::typeName, &wallPolyPatch::typeName, &symmetryPolyPatch::typeName, &wedgePolyPatch::typeName, &polyPatch::typeName, &polyPatch::typeName, &polyPatch::typeName, &polyPatch::typeName, &symmetryPolyPatch::typeName, &oldCyclicPolyPatch::typeName};enum patchTypeNames{ PISTON, VALVE, LINER, CYLINDERHEAD, AXIS, WEDGE, INFLOW, OUTFLOW, PRESIN, PRESOUT, SYMMETRYPLANE, CYCLIC};const char *kivaPatchNames[nBCs]={ "piston", "valve", "liner", "cylinderHead", "axis", "wedge", "inflow", "outflow", "presin", "presout", "symmetryPlane", "cyclic"};List< SLList< face > > pFaces[nBCs]
static commsTypes defaultCommsType
Default commsType.
const polyBoundaryMesh & patches
"nonBlocking" : (MPI_Isend, MPI_Irecv)
Mesh consisting of general polyhedral cells.
List< label > labelList
A List of labels.
dimensionSet transform(const dimensionSet &ds)
Return the argument; transformations do not change the dimensions.
bool returnReduceOr(const bool value, const label comm=UPstream::worldComm)
Perform logical (or) MPI Allreduce on a copy. Uses UPstream::reduceOr.
prefixOSstream Pout
OSstream wrapped stdout (std::cout) with parallel prefix.
forAllConstIters(mixture.phases(), phase)